- Welcome
- Use case
- Getting Started
-
Searching Records
- Performing a Basic Search
- Performing an Advanced Search
- Performing a List Search
- Performing a Keyword Search of UUMC Pathology Reports for all Patients in the Database
- Performing a Keyword Search of UUMC Pathology Reports for the Patients Associated with a Specific Set of Specimens
- Restrictions on Searches
- Reports
-
iQ Tool
- Adding Columns to a Query
- Starting the iQ Tool
- iQ Tool Window
- Current Query Data Group
- Saved Queries List
- Top Portion of the Selected
- Display or Report Columns Section
- Find/Filters Section
- Running a Preexisting Query
- Creating a Query
- Create Query Window
- Copying and Altering a Preexisting Query
- Removing Columns from a Query
- Editing Column Parameters in a Query
- Changing the Order of Columns in a Query
- Adding Filters to a Query
- Editing Filters in a Query
- Ways of Comparing Data
- Removing Filters From a Query
- Results Window
- Application Data Structure
- Application Database Fields Alphabetical List
- Application Datatree
- Field Paths List for the iQ Tool
-
Adding Specimens to the Database
- Adding a Single Specimen using the Add Specimen Wizard
- Adding a Batch of Specimens using the Add Specimen Expert Tool
- Saving a Batch of Specimens to be added as a Work in Progress
- Finishing a Work in Progress Batch
- Printing Barcodes for a Specimens in a Batch added using the Add Specimen Expert Tool
- Customizing the Add Specimen Expert Tool to Streamline Specimen Batch Entry
- Changing which Box an Add Expert Template Points for Adding Storage
- Importing FFPE Samples from UUMC
- Entering and Editing Specimen Records
- Transformations
- Specimen Disbursement and Registration
- Reports and Records
- Adding a Pathology Report to a Specimen Record
- Performing a DEXT Import of a Pathology Import
- Checking on the status of your DEXT Import Request
- Adding a Medical Record to a Specimen Record
- Editing Patient or Collection Records
- Editing Collection Records
- Editing Patient Records
- Diagnoses
- Adding a Diagnosis to a Patient Record
- Linking an Existing Diagnosis to one or more Collections
- Linking a Collection to a Diagnosis
- Recording a Consent for a Patient
- Reviewing a Patient's Consents
- Uploading a Patient's Consent Form
- Managing Patient Consents
- External (to itBioPath) Data Sources
- Managing Dictionaries
-
Storage
- Editing Aliquots
- Connecting a Barcode Label Printer to itBioPath
- Removing a Barcode Label Printer from itBioPath
- Freezer Management
- Viewing the Contents of a Box in a Freezer
- Accessing the Specimen Record for the Specimen associated with an Aliquot
- Editing Box Details
- Adding a New Box to a Freezer from the Add Aliquot Window
- Managing Protocols, Projects, and Related User Permissions
- Window, Tab, and Field Descriptions
- Miscellaneous
A history of specimen transformations that includes all parents, children and siblings of a specimen (including multiple generations if applicable) is displayed in the Transformed Specimens tree on the Related Specimens tab of the Specimen window.
This view gives a comprehensive view of the relationship between all of the samples transformed from an originally collected sample. In order to have a complete picture of the specimen relationship, the current specimen will also be listed in the Transformed Specimens tree. Child specimens are all grouped under their parent in the tree, so the relationship of these transformations is represented by the different levels of the tree. Each branch or level of the tree may be collapsed (to hide the children) or expanded (to display the children) by clicking on the triangle to the left of the parent sample for that branch. All samples that are related by such transformations will also appear in the Specimens in the Same Collection list on this tab, since a specimen and all of its transformations will have originally been collected as part of a single collection. When you click on a sample that is related by transformation to the current sample in either list, that sample will be highlighted in both lists. (Of course, other samples collected in the same collection event but not related by transformation to the current specimen will also appear in this list.) The Specimen window for any specimen in either list may be opened simply by double-clicking on that specimen in the list. See Transforming a Specimen for instructions on how to create a specimen record for a transformed specimen.