- Welcome
- Use case
- Getting Started
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Searching Records
- Performing a Basic Search
- Performing an Advanced Search
- Performing a List Search
- Performing a Keyword Search of UUMC Pathology Reports for all Patients in the Database
- Performing a Keyword Search of UUMC Pathology Reports for the Patients Associated with a Specific Set of Specimens
- Restrictions on Searches
- Reports
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iQ Tool
- Adding Columns to a Query
- Starting the iQ Tool
- iQ Tool Window
- Current Query Data Group
- Saved Queries List
- Top Portion of the Selected
- Display or Report Columns Section
- Find/Filters Section
- Running a Preexisting Query
- Creating a Query
- Create Query Window
- Copying and Altering a Preexisting Query
- Removing Columns from a Query
- Editing Column Parameters in a Query
- Changing the Order of Columns in a Query
- Adding Filters to a Query
- Editing Filters in a Query
- Ways of Comparing Data
- Removing Filters From a Query
- Results Window
- Application Data Structure
- Application Database Fields Alphabetical List
- Application Datatree
- Field Paths List for the iQ Tool
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Adding Specimens to the Database
- Adding a Single Specimen using the Add Specimen Wizard
- Adding a Batch of Specimens using the Add Specimen Expert Tool
- Saving a Batch of Specimens to be added as a Work in Progress
- Finishing a Work in Progress Batch
- Printing Barcodes for a Specimens in a Batch added using the Add Specimen Expert Tool
- Customizing the Add Specimen Expert Tool to Streamline Specimen Batch Entry
- Changing which Box an Add Expert Template Points for Adding Storage
- Importing FFPE Samples from UUMC
- Entering and Editing Specimen Records
- Transformations
- Specimen Disbursement and Registration
- Reports and Records
- Adding a Pathology Report to a Specimen Record
- Performing a DEXT Import of a Pathology Import
- Checking on the status of your DEXT Import Request
- Adding a Medical Record to a Specimen Record
- Editing Patient or Collection Records
- Editing Collection Records
- Editing Patient Records
- Diagnoses
- Adding a Diagnosis to a Patient Record
- Linking an Existing Diagnosis to one or more Collections
- Linking a Collection to a Diagnosis
- Recording a Consent for a Patient
- Reviewing a Patient's Consents
- Uploading a Patient's Consent Form
- Managing Patient Consents
- External (to itBioPath) Data Sources
- Managing Dictionaries
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Storage
- Editing Aliquots
- Connecting a Barcode Label Printer to itBioPath
- Removing a Barcode Label Printer from itBioPath
- Freezer Management
- Viewing the Contents of a Box in a Freezer
- Accessing the Specimen Record for the Specimen associated with an Aliquot
- Editing Box Details
- Adding a New Box to a Freezer from the Add Aliquot Window
- Managing Protocols, Projects, and Related User Permissions
- Window, Tab, and Field Descriptions
- Miscellaneous
The 'Display' section on the iQ tool window controls the columns that will appear when the query is run.(See The Application Data Structure.) This section has two columns. The first (Path) describes the path within the application's data structure where the information to be displayed in each of the query's columns can be found. The second column (Column) lists how the columns will appear in the query results. Above the section are the add and remove buttons, which are used to add or remove columns from the query parameters. (See Working with Grids) The list of fields will be displayed in the query from left to right, with the first field in the list appearing as the leftmost column. To change the order in which these columns appear, click on a column that you would like to move and then click the and move down buttons (recognizable by the icons on the buttons featuring upward and downward arrows) to move it up or down in the list — and consequently left or right, respectively, among the columns as displayed in the query results.
To the right of 'Display' are three headers with checkboxes. The 'For All Results' checkbox is the default setting and displays all the results of a query in a list. The 'Consolidated' checkbox, when selected, means that when the query is run, any rows that display identical information will be combined into a single row. The 'Tallied and Consolidated' checkbox, when selected, functions similarly in that any rows which display identical information will still be combined into a single row. However, additional columns will be added to the query showing the number of records that match the information displayed in that row. In other words, you will get a list of unique values with a count of how many times each unique value appears among the records included in the query. If any of the columns selected on the Report Columns tab contain restricted information, the only information that will be displayed in the column when the query is run will be for those records for which you have the proper permissions for viewing this restricted information. Records included in the query which have information in these columns but for which you do not have the necessary permissions will show only the word (restricted) in place of the restricted data. The words Restricted report — data omitted from the report will also appear in red at the bottom of the IQ results window.
The default setting 'For All Results' displays all the individual records when the the query is run.
Consolidated query results — five combinations of tissue site and cancer status were found among all the records included in the query.
The same query as the original query run as 'Tally and Consolidate' display the same five combinations as before. This query also displays how many instances of the combination occurred within all the records.